Package index
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add_concentration() - Add concentrations
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add_data_replicates() - Add data replicates
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add_day0_data() - Add data with day 0
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create_synthetic_cell_lines() - Create data.table with synthetic cell lines
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create_synthetic_drugs() - Create data.table with synthetic drugs
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generate_e_inf() - Calculate E inf metric
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generate_ec50() - Calculate EC50 metric
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generate_hill_coef() - Generate hill coefficient
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generate_response_data() - Generate response data
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get_test_dataset_paths() - get_test_dataset_paths
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prepareCodilutionData() - prepareCodilutionData
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prepareComboMergedData() - prepareComboMergedData
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prepareData() - prepareData
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prepareMergedData() - prepareMergedData
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DepMap_CRISPRGeneEffect - CRISPR Gene Effect Scores
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DepMap_Model - DepMap Models (Cell Line Metadata)
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DepMap_OmicsCNGene - Copy Number Variation (CNV)
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DepMap_OmicsExpressionProteinCodingGenesTPMLogp1 - Gene Expression (Log2 TPM)
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DepMap_OmicsSomaticMutationsMatrixDamaging - Somatic Mutations (Damaging)
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DepMap_OmicsSomaticMutationsMatrixHotspot - Somatic Mutations (Hotspot)
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PRISMBroadScreen_Hagenbeek_NatComm_2026 - PRISM Broad Screen Cancer Cell Line Viability Dataset