Testing synthetic data form gDRtestData package — test_synthetic_data • gDRcore

Testing synthetic data form gDRtestData package

Usage

test_synthetic_data(
  original,
  data,
  dataName,
  override_untrt_controls = NULL,
  assays = c("Normalized", "Averaged", "Metrics"),
  tolerance = 0.001
)

Arguments

original: original MAE assay
data: datase MAE or data.table
dataName: dataset name
override_untrt_controls: named list containing defining factors in the treatments
assays: assays to test
tolerance: tolerance factor

Value

NULL

Examples

set.seed(2)
cell_lines <- gDRtestData::create_synthetic_cell_lines()
drugs <- gDRtestData::create_synthetic_drugs()
data <- "finalMAE_small"
original <- gDRutils::get_synthetic_data(data)
test_synthetic_data(original, original, "test")
#> Test passed with 1 success 🥇.
#> Test passed with 1 success 🎊.
#> Test passed with 1 success 🎉.