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Changelog

Source: NEWS.md

gDR 1.11.11 - 2026-10-08

  • update authors data

gDR 1.11.10 - 2026-10-03

  • use qualified calls for the fitting-layer functions the Incucyte report templates rely on

gDR 1.11.9 - 2026-09-30

  • read the Incucyte analysis configuration supplied for the run, and fail if it cannot be staged
  • fix the silent removal of a path argument that resolves to no file

gDR 1.11.8 - 2026-09-24

  • fix rendering of the rowData and colData tables in the processing report on Bioconductor 3.24

gDR 1.11.7 - 2026-09-19

  • fix detection of an existing report so that push-only runs can start

gDR 1.11.6 - 2026-09-14

  • drop gDRplots from Suggests, since it has no CRAN or Bioconductor release and blocks dependency resolution
  • document the gDRplots run-time requirement of the bundled report templates in run_report()

gDR 1.11.5 - 2026-09-11

  • add the five Incucyte helpers the Incucyte report templates call, so those templates run outside a deployment

gDR 1.11.4 - 2026-09-01

  • add run_report(), a deployment-agnostic driver for the report pipeline, together with its report templates

gDR 1.11.3 - 2026-06-08

  • add custom annotation support to import_data

gDR 1.11.2 - 2026-05-26

  • apply updated gDRstyle rules

gDR 1.11.1 - 2026-04-29

  • synchronize Bioconductor and GitHub versioning

gDR 1.9.1 - 2025-10-30

  • synchronize Bioconductor and GitHub versioning

gDR 1.7.2 - 2025-06-11

  • update installation instructions

gDR 1.5.1 - 2024-11-05

  • synchronize Bioconductor and GitHub versioning

gDR 1.3.1 - 2024-05-27

  • synchronize Bioconductor and GitHub versioning

gDR 1.1.7 - 2024-05-15

  • fix check notes

gDR 1.1.6 - 2024-05-08

  • fix typo

gDR 1.1.5 - 2024-02-26

  • improve pkgdown site
    • improved references
    • valid NEWS.md

gDR 1.1.4 - 2024-02-12

  • make documentation compatible with pkdgdown

gDR 1.1.3 - 2024-01-22

  • add new description fields

gDR 1.1.2 - 2024-01-19

  • update package vignette

gDR 1.1.1 - 2023-11-22

  • sync main with devel branch

gDR 1.1.0 - 2023-10-24

  • release Bioc 3.18

gDR 1.0.0 - 2023-10-24

  • prerelease Bioc 3.18

gDR 0.99.9 - 2023-10-18

  • adjust NEWS to Bioc format

gDR 0.99.8 - 2023-08-17

  • update README

gDR 0.99.7 - 2023-08-17

  • clean-up
  • update documentation
  • simplify Docker-based installation

gDR 0.99.6 - 2023-05-22

  • format the vignette with BiocStyle

gDR 0.99.5 - 2023-05-11

  • fix related with data.table

gDR 0.99.4 - 2023-04-20

  • switch to OSI license

gDR 0.99.3 - 2023-04-13

  • update documentation - Bioc-compatibility

gDR 0.99.2 - 2023-04-07

  • update maintainer

gDR 0.99.1 - 2023-04-04

  • update requirements - gDRcore

gDR 0.99.0 - 2023-03-23

  • switch to Bioc compatible versioning

gDR 0.1.37 - 2023-03-23

  • drop gDRcomponents dependency

gDR 0.1.3.6 - 2023-03-13

  • bugfix - assure proper path to shared_dir in the vignette

gDR 0.1.3.5 - 2023-03-08

  • add functions from gDRcomponents

gDR 0.1.3.4 - 2023-02-28

  • update vignette

gDR 0.1.3.3 - 2023-01-18

  • fixed NOTES

gDR 0.1.3.2 - 2022-12-15

  • update deps

gDR 0.1.3.1 - 2022-10-05

  • add BioCparallel and kableExtra as dep

gDR 0.1.3.0 - 2022-06-02

  • release 1.3.0

gDR 0.0.0.12 - 2022-04-21

  • update unit tests

gDR 0.0.0.11 - 2022-04-21

  • remove redundant function argument

gDR 0.0.0.10 - 2022-04-20

  • adjust for removal of large RDS files from gDRtestData

gDR 0.0.0.9 - 2021-09-13

  • update CODEOWNERS to use teams

gDR 0.0.0.7 - 2021-09-13

  • remove unnecessary exports

gDR 0.0.0.6 - 2021-09-13

  • update version and package dependencies

gDR 0.0.0.5 - 2021-09-13

  • update vignette

gDR 0.0.0.4 - 2021-06-25

  • update version and package dependencies

gDR 0.0.0.3 - 2021-06-25

  • update roxygen documentation

gDR 0.0.0.2 - 2021-06-24

  • add example data

gDR 0.0.0.1 - 2021-02-03

  • initial version