Set unique primary cell line identifiers in the table

This function sets the primary cell line field in data.frame-like object to be unique by appending the secondary cell line field in parentheses for duplicates.

Usage

set_unique_cl_names_dt(
  dt,
  primary_name = get_env_identifiers("cellline_name"),
  secondary_name = get_env_identifiers("cellline"),
  sep = " "
)

Arguments

dt

data.table, data.frame or DFrame with the data

primary_name

string with the name of the primary cell line field

secondary_name

string with the name of the secondary cell line field

sep

string with separator added before suffix

Value

fixed input table with unique primary cell line field in dt

Examples

col_data <- S4Vectors::DataFrame(CellLineName = c("ID1", "ID1"), clid = c("C1", "C2"))
col_data <- set_unique_cl_names_dt(col_data)