Set Unique Parental Identifiers — set_unique_cl_names • gDRutils

This function sets the CellLineName field in colData to be unique by appending the clid in parentheses for duplicates.

Usage

set_unique_cl_names(se)

Arguments

se: A SummarizedExperiment object.

Value

A SummarizedExperiment object with unique CellLineName in colData.

Examples

se <- SummarizedExperiment::SummarizedExperiment(
  assays = list(counts = matrix(1:4, ncol = 2)),
  colData = S4Vectors::DataFrame(CellLineName = c("ID1", "ID1"), clid = c("C1", "C2"))
)
se <- set_unique_cl_names(se)